Topological Data Analysis: Mapper Algorithm


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Documentation for package ‘MapperAlgo’ version 1.0

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cluster_cutoff_at_first_empty_bin Cut the hierarchical clustering tree to define clusters
cover_points Cover points based on intervals and overlap
lsfi_from_lsmi Convert level set multi-index (lsmi) to flat index (lsfi)
lsmi_from_lsfi Convert level set flat index (lsfi) to multi-index (lsmi)
MapperAlgo Topological data analysis: Mapper algorithm
mapperEdges Create Mapper Edges
mapperVertices Create Mapper Vertices
perform_clustering Perform clustering within a level set