Last updated on 2025-09-04 01:48:42 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.5.0 | 20.87 | 250.49 | 271.36 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 2.5.2 | 14.68 | 155.29 | 169.97 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.5.2 | 443.98 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.5.2 | 415.03 | OK | |||
| r-devel-windows-x86_64 | 2.5.0 | 24.00 | 263.00 | 287.00 | NOTE | |
| r-patched-linux-x86_64 | 2.5.2 | 23.14 | 233.50 | 256.64 | OK | |
| r-release-linux-x86_64 | 2.5.0 | 21.05 | 233.93 | 254.98 | NOTE | |
| r-release-macos-arm64 | 2.5.0 | 104.00 | OK | |||
| r-release-macos-x86_64 | 2.5.2 | 399.00 | OK | |||
| r-release-windows-x86_64 | 2.5.0 | 24.00 | 263.00 | 287.00 | NOTE | |
| r-oldrel-macos-arm64 | 2.5.0 | 103.00 | OK | |||
| r-oldrel-macos-x86_64 | 2.5.2 | 230.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 2.5.2 | 27.00 | 398.00 | 425.00 | OK |
Version: 2.5.0
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
get_trackdata.Rd: wrasspOutputInfos, tibble
query.Rd: tibble
requery_hier.Rd: tibble
requery_seq.Rd: tibble
serve.Rd: stopAllServers, httpuv
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-windows-x86_64, r-release-linux-x86_64, r-release-windows-x86_64
Version: 2.5.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [68s/96s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> test_check("emuR")
Loading required package: emuR
Attaching package: 'emuR'
The following object is masked from 'package:base':
norm
[1] "INFO: No bundleList dir found in emuDB (path: /Volumes/Temp/tmp/Rtmp3NYW24/emuR_testthat/ae_emuDB/bundleLists)! Creating directory..."
INFO: parsing 14 fms segments/events
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INFO: parsing 14 fms segments/events
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Read 16 items
Read 12 records
Read 24 items
Read 20 records
[ FAIL 8 | WARN 0 | SKIP 38 | PASS 830 ]
══ Skipped tests (38) ══════════════════════════════════════════════════════════
• On CRAN (7): 'test_emuR-autobuild.R:19:3', 'test_emuR-database.R:643:3',
'test_emuR-database.R:717:3', 'test_emuR-query.database.R:378:5',
'test_emuR-query.database.R:631:5', 'test_emuR-query.database.R:643:5',
'test_emuR-query.database.R:650:5'
• empty test (29): 'test_emuR-autoproc_annots.R:13:1',
'test_emuR-autoproc_annots.R:53:1',
'test_emuR-convert_BPFCollection.R:516:1',
'test_emuR-convert_TextGridCollection.R:38:1',
'test_emuR-convert_TextGridCollection.R:124:1',
'test_emuR-database.DBconfig.EMUwebAppConfig.R:49:3',
'test_emuR-database.DBconfig.EMUwebAppConfig.R:19:1',
'test_emuR-database.DBconfig.EMUwebAppConfig.R:98:3',
'test_emuR-database.DBconfig.EMUwebAppConfig.R:102:3',
'test_emuR-database.DBconfig.EMUwebAppConfig.R:69:1',
'test_emuR-database.DBconfig.EMUwebAppConfig.R:147:3',
'test_emuR-database.DBconfig.EMUwebAppConfig.R:151:3',
'test_emuR-database.DBconfig.EMUwebAppConfig.R:113:1',
'test_emuR-database.DBconfig.R:45:1', 'test_emuR-database.DBconfig.R:148:1',
'test_emuR-database.DBconfig.R:239:1', 'test_emuR-database.DBconfig.R:299:1',
'test_emuR-database.DBconfig.R:353:1', 'test_emuR-database.DBconfig.R:424:1',
'test_emuR-database.DBconfig.R:524:3', 'test_emuR-database.DBconfig.R:512:1',
'test_emuR-database.R:20:1', 'test_emuR-database.caching.R:22:1',
'test_emuR-database.files.R:55:3', 'test_emuR-database.files.R:9:1',
'test_emuR-emuRsegs.R:18:1', 'test_emuR-emuRtrackdata.R:17:1',
'test_emuR-export_TextGridCollection.R:17:1',
'test_emuR-query.database.R:17:1'
• skipping as it takes 4 ever to test -> make sure to rerun on deploy (2):
'test_emuR-bas_webservices.R:12:13', 'test_emuR-bas_webservices.R:30:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_emuR-database.DBconfig.R:67:5'): add = (C)RUD ──────────────────
Error: vector memory limit of 16.0 Gb reached, see mem.maxVSize()
Backtrace:
▆
1. ├─emuR::add_ssffTrackDefinition(...) at test_emuR-database.DBconfig.R:67:5
2. │ └─emuR::list_files(emuDBhandle, fileExtension)
3. │ └─... %>% ...
4. ├─dplyr::mutate(...)
5. ├─dplyr::filter(., stringr::str_detect(.data$bundle, bundlePattern))
6. ├─dplyr::filter(., stringr::str_detect(.data$session, sessionPattern))
7. ├─dplyr::mutate(., bundle = stringr::str_remove(.data$bundle, "_bndl$"))
8. ├─dplyr::mutate(...)
9. ├─dplyr::filter(., endsWith(.data$bundle, "_bndl"))
10. ├─dplyr::filter(., endsWith(.data$session, "_ses"))
11. ├─dplyr::filter(., !is.na(.data$file))
12. ├─dplyr::filter(., !is.na(.data$bundle))
13. ├─dplyr::filter(., !is.na(.data$session))
14. ├─tidyr::separate(...)
15. └─tidyr:::separate.data.frame(...)
16. └─tidyr:::str_separate(...)
17. └─tidyr:::str_split_fixed(...)
18. └─tidyr:::simplifyPieces(pieces, n, fill == "left")
── Failure ('test_emuR-database.DBconfig.R:84:5'): list = C(R)UD ───────────────
df$name not equal to c("dft", "fm", "newTrackName").
Lengths differ: 2 is not 3
── Failure ('test_emuR-database.DBconfig.R:85:5'): list = C(R)UD ───────────────
df$columnName not equal to c("dft", "fm", "pitch").
Lengths differ: 2 is not 3
── Failure ('test_emuR-database.DBconfig.R:86:5'): list = C(R)UD ───────────────
df$fileExtension not equal to c("dft", "fms", "pit").
Lengths differ: 2 is not 3
── Error ('test_emuR-database.DBconfig.R:93:5'): remove = CRU(D) ───────────────
Error in `remove_ssffTrackDefinition(ae, name = "newTrackName", deleteFiles = TRUE)`: No ssffTrackDefinitions found with name: 'newTrackName'
Backtrace:
▆
1. └─emuR::remove_ssffTrackDefinition(ae, name = "newTrackName", deleteFiles = TRUE) at test_emuR-database.DBconfig.R:93:5
── Error ('test_emuR-database.R:693:3'): rename bundles works correctly ────────
Error: vector memory limit of 16.0 Gb reached, see mem.maxVSize()
Backtrace:
▆
1. ├─emuR::rename_bundles(db, bundles) at test_emuR-database.R:693:3
2. │ └─emuR::list_files(...)
3. │ └─... %>% ...
4. ├─dplyr::mutate(...)
5. ├─dplyr::filter(., stringr::str_detect(.data$bundle, bundlePattern))
6. ├─dplyr::filter(., stringr::str_detect(.data$session, sessionPattern))
7. ├─dplyr::mutate(., bundle = stringr::str_remove(.data$bundle, "_bndl$"))
8. ├─dplyr::mutate(...)
9. ├─dplyr::filter(., endsWith(.data$bundle, "_bndl"))
10. ├─dplyr::filter(., endsWith(.data$session, "_ses"))
11. ├─dplyr::filter(., !is.na(.data$file))
12. ├─dplyr::filter(., !is.na(.data$bundle))
13. ├─dplyr::filter(., !is.na(.data$session))
14. ├─tidyr::separate(...)
15. └─tidyr:::separate.data.frame(...)
16. └─tidyr:::str_separate(...)
17. └─tidyr:::str_split_fixed(...)
18. └─tidyr:::simplifyPieces(pieces, n, fill == "left")
── Error ('test_emuR-database.files.R:87:7'): list = C(R)UD ────────────────────
Error: vector memory limit of 16.0 Gb reached, see mem.maxVSize()
Backtrace:
▆
1. ├─emuR::list_files(ae) at test_emuR-database.files.R:87:7
2. │ └─... %>% ...
3. ├─dplyr::mutate(...)
4. ├─dplyr::filter(., stringr::str_detect(.data$bundle, bundlePattern))
5. ├─dplyr::filter(., stringr::str_detect(.data$session, sessionPattern))
6. ├─dplyr::mutate(., bundle = stringr::str_remove(.data$bundle, "_bndl$"))
7. ├─dplyr::mutate(...)
8. ├─dplyr::filter(., endsWith(.data$bundle, "_bndl"))
9. ├─dplyr::filter(., endsWith(.data$session, "_ses"))
10. ├─dplyr::filter(., !is.na(.data$file))
11. ├─dplyr::filter(., !is.na(.data$bundle))
12. ├─dplyr::filter(., !is.na(.data$session))
13. ├─tidyr::separate(...)
14. └─tidyr:::separate.data.frame(...)
15. └─tidyr:::str_separate(...)
16. └─tidyr:::str_split_fixed(...)
17. └─tidyr:::simplifyPieces(pieces, n, fill == "left")
── Error ('test_emuR-get_trackdata.R:257:3'): non wrassp functions work ────────
Error: vector memory limit of 16.0 Gb reached, see mem.maxVSize()
Backtrace:
▆
1. ├─emuR::list_files(ae, fileExtension = "fms") at test_emuR-get_trackdata.R:257:3
2. │ └─... %>% ...
3. ├─dplyr::mutate(...)
4. ├─dplyr::filter(., stringr::str_detect(.data$bundle, bundlePattern))
5. ├─dplyr::filter(., stringr::str_detect(.data$session, sessionPattern))
6. ├─dplyr::mutate(., bundle = stringr::str_remove(.data$bundle, "_bndl$"))
7. ├─dplyr::mutate(...)
8. ├─dplyr::filter(., endsWith(.data$bundle, "_bndl"))
9. ├─dplyr::filter(., endsWith(.data$session, "_ses"))
10. ├─dplyr::filter(., !is.na(.data$file))
11. ├─dplyr::filter(., !is.na(.data$bundle))
12. ├─dplyr::filter(., !is.na(.data$session))
13. ├─tidyr::separate(...)
14. └─tidyr:::separate.data.frame(...)
15. └─tidyr:::str_separate(...)
16. └─tidyr:::str_split_fixed(...)
17. └─tidyr:::simplifyPieces(pieces, n, fill == "left")
[ FAIL 8 | WARN 0 | SKIP 38 | PASS 830 ]
Error: Test failures
In addition: Warning message:
call dbDisconnect() when finished working with a connection
Execution halted
Flavor: r-oldrel-macos-x86_64