Last updated on 2025-08-06 01:50:29 CEST.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.66 | 249.40 | 262.06 | OK | |
r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.84 | 247.01 | 257.85 | OK | |
r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.69 | OK | |||
r-devel-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
r-patched-linux-x86_64 | 1.1.4 | 13.84 | 266.70 | 280.54 | OK | |
r-release-linux-x86_64 | 1.1.4 | 13.83 | 260.48 | 274.31 | OK | |
r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
r-release-macos-x86_64 | 1.1.4 | 155.00 | ERROR | |||
r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
r-oldrel-macos-x86_64 | 1.1.4 | 158.00 | ERROR | |||
r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 242.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/109s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.440, system: 0.034, elapsed: 2.025 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.801, system: 0.081, elapsed: 12.314 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.269 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.705, system: 0.193, elapsed: 6.414 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.250 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.816, system: 0.345, elapsed: 21.972 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.457, system: 0.031, elapsed: 2.230 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.880, system: 0.071, elapsed: 13.744 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.013, elapsed: 0.323 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.573, system: 0.159, elapsed: 6.077 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.003, elapsed: 0.315 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.785, system: 0.295, elapsed: 23.626 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.496, system: 0.027, elapsed: 2.446 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.824, system: 0.060, elapsed: 12.103 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.285 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.666, system: 0.187, elapsed: 5.008 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.003, elapsed: 0.219 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.136, system: 0.205, elapsed: 0.995 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.091, system: 0.512, elapsed: 22.011 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.463, system: 0.030, elapsed: 2.107 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.848, system: 0.127, elapsed: 12.619 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.013, elapsed: 0.281 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.656, system: 0.213, elapsed: 5.945 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.008, elapsed: 0.222 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.026, system: 0.477, elapsed: 13.349 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.974, system: 0.897, elapsed: 35.468 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/105s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.532, system: 0.045, elapsed: 1.956 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.837, system: 0.075, elapsed: 11.602 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.013, elapsed: 0.256 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.475, system: 0.188, elapsed: 5.104 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.003, elapsed: 0.242 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.727, system: 0.342, elapsed: 19.925 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.468, system: 0.025, elapsed: 2.365 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.867, system: 0.065, elapsed: 14.699 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.013, elapsed: 0.269 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.548, system: 0.162, elapsed: 5.309 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.261 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.754, system: 0.289, elapsed: 23.732 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.559, system: 0.040, elapsed: 2.467 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.910, system: 0.069, elapsed: 12.302 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.247 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.397, system: 0.153, elapsed: 4.400 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.002, elapsed: 0.238 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.025, system: 0.196, elapsed: 0.910 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.857, system: 0.512, elapsed: 21.557 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.490, system: 0.028, elapsed: 2.187 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.885, system: 0.060, elapsed: 11.528 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.248 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.494, system: 0.184, elapsed: 4.969 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.003, elapsed: 0.165 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.048, system: 0.580, elapsed: 13.728 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.887, system: 0.899, elapsed: 33.805 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64