HI-C diffeREntial Analysis Method


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Documentation for package ‘hicream’ version 0.0.1

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AggloClust2D Performs Constrained 2D Agglomerative Clustering
loadData Load and Normalize Hi-C Data
performTest Perform diffHic Test
pighic Dataset "pighic"
plot.res2D Performs Constrained 2D Agglomerative Clustering
plot.resdiff Perform diffHic Test
plot.resposthoc Perform Post Hoc Inference
postHoc Perform Post Hoc Inference
print.res2D Performs Constrained 2D Agglomerative Clustering
print.resdiff Perform diffHic Test
print.resposthoc Perform Post Hoc Inference
summary.res2D Performs Constrained 2D Agglomerative Clustering
summary.resdiff Perform diffHic Test
summary.resposthoc Perform Post Hoc Inference